Visit must have always a source_visist_id

FINNGEN / ETL

second version for the ETL of the detailed longitudinal data to the OMOP-CDM

https://finngen.github.io/ETL/

MIT License

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Visit must have always a source_visist_id #193

Open javier-gracia-tabuenca-tuni opened 2 months ago

javier-gracia-tabuenca-tuni commented 2 months ago

To be checked If there is a row in service sector data where one of the codes that define the visit is incorrect eg. SOURCE=INPAT, CODE6 = R@# Then the visit does not get mapped

If so this should default to be mapped only to SOURCE=INPAT

javier-gracia-tabuenca-tuni commented 2 months ago

same for https://github.com/FINNGEN/FinnGenUtilsR/issues/36