FINNGEN META_ANALYSIS issues - Githubissues

FINNGEN / META_ANALYSIS

Tools for doing x way meta-analysis

MIT License

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x/y/mt without chr prefix

#17 juhis closed 4 years ago
0
We also will want to include pre-meta QC steps, including detecting potential sample overlapping

#16 weizhouUMICH opened 4 years ago
0
Heterogeneity test is needed

#15 weizhouUMICH closed 4 years ago
0
Left-align variants and match alleles to reference

#14 juhis closed 2 years ago
1
Multiallelics handling

#13 juhis closed 4 years ago
3
Ignores bad lines (e.g. empty lines in input in liftover)

#12 Fedja closed 4 years ago
0
Error on disorder mk

#11 Fedja closed 4 years ago
0
Error out on non-sorted summary stats

#10 Fedja closed 4 years ago
1
Multiple variants jk

#9 juhis closed 4 years ago
0
Issue with doing the lift.py wtih joinsort.py

#8 aelliott08 closed 3 years ago
0
added a SNP column (chr:pos:ref:alt)

#7 mkanai closed 5 years ago
0
Multiple variants jk

#6 juhis closed 5 years ago
0
Add leave one out wei

#5 weizhouUMICH closed 5 years ago
0
fix for multiple identical variants in a study and non-ATCG variants

#4 juhis closed 5 years ago
1
Multiallelics and double results

#3 juhis closed 5 years ago
0
aling to all studies

#2 Fedja closed 5 years ago
0
chain file 38 to 37, ignore extra contigs

#1 juhis closed 5 years ago
0

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