add columns with the # of other variants with r2 > 0.8 and r2 > 0.6 (providing a general sense of whether the association is likely localized to a few SNPs or many SNPs)
I think we could have a separate ldthreshold flag for this instead of using the _relaxed LD partners as we may want to be lenient in catalog lookup but having sense of the "localization" of the signal is separate concern with likely different r2 threshold
add columns with the # of other variants with r2 > 0.8 and r2 > 0.6 (providing a general sense of whether the association is likely localized to a few SNPs or many SNPs)
I think we could have a separate ldthreshold flag for this instead of using the _relaxed LD partners as we may want to be lenient in catalog lookup but having sense of the "localization" of the signal is separate concern with likely different r2 threshold