FINNGEN / autoreporting

MIT License
0 stars 1 forks source link

custom beta match resource does not always work #189

Closed Fedja closed 3 years ago

Fedja commented 3 years ago

e.g. in atopic https://github.com/FINNGEN/betamatch-ext-data/blob/master/data/L12_ATOPIC.csv

I had hit with chr19_8677131_C_T but it was not found although LD is > 0.9

The resources in repo are not necessarily in correct strand or order so might be that matching does not take that into account?