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FINNGEN
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kanta_lab_preprocessing
Repo for kanta lab QC
MIT License
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UPDATES & OMOP
#8
Closed
piotor87
closed
5 months ago
piotor87
commented
5 months ago
Changes of last weeks
changed pipe style of pandas to be easier to read
error logging changed back to immediate (i.e. filtered out entries are dumped on the spot)
added unit fixing (big regex) and SOTE mapping
added output of list of all unit changes done
added abnormality filter
added requirements file
added omop mapping script
simplified
--mp
flag by removing
--jobs
parameter (merged into one)
updated README
Changes of last weeks
--mp
flag by removing--jobs
parameter (merged into one)