FOI-Bioinformatics / flextaxd

FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )
GNU General Public License v3.0
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Self linked parents #37

Closed davve2 closed 2 years ago

davve2 commented 3 years ago

Some parts of the database contains identical nodes at several levels in the tree,

GB_GCA_003697105.1      d__Bacteria;p__4572-55;c__4572-55;o__J002;f__J002;g__J002;s__J002 sp003697105
GB_GCA_002084765.1      d__Bacteria;p__4572-55;c__4572-55;o__4572-55;f__4572-55;g__4572-55;s__4572-55 

What is the best way of solving this issue