The output result.tsv files include a field for total number of reads (coverage) for all HLAs detected in a sample. Is there a way to separate read count by HLA allele? The output pdf files contain this information graphically, but I would like to see the numbers themselves. Is it possible to keep the intermediate files that may include this information? Thanks.
The output result.tsv files include a field for total number of reads (coverage) for all HLAs detected in a sample. Is there a way to separate read count by HLA allele? The output pdf files contain this information graphically, but I would like to see the numbers themselves. Is it possible to keep the intermediate files that may include this information? Thanks.