search

FZJ-INM1-BDA / siibra-configurations

1 stars 1 forks source link

jba3.0 icbm152 hoc1 left hemisphere statistical map is slightly misaligned #25

Closed xgui3783 closed 7 months ago

xgui3783 commented 1 year ago

as of 01d3d09

code to reproduce

import siibra
julichbrain = siibra.parcellations['julich 3.0']
pmaps = julichbrain.get_map(
    space=siibra.spaces['mni 152'],
    maptype=siibra.MapType.STATISTICAL
)
pmap = pmaps.fetch(region='hoc1 left')
plotting.plot_stat_map(pmap, title=f'hoc1 left of {pmaps.parcellation.name}')

results in

image

which is slightly misaligned

AhmetNSimsek commented 8 months ago

The issue is persistent in all PMAPs of Julich Brain 3. The maps are not clipped with template masks. It is not clear if this is intentional, however, Julich Brain team is informed about the issue.

AhmetNSimsek commented 7 months ago

The same issue as https://github.com/FZJ-INM1-BDA/siibra-configurations/issues/4. Will be tracked there.