v2.13.5

[github-actions[bot]]

Staging Checklist

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home page

General

• [x] Can access front page
• [x] Can login to oidc v2 via top-right

Atlas data specific

• [ ] Human multilevel atlas
  • [x] on click from home page, MNI152, Julich v2.9 loads without issue
  • [x] on hover, show correct region name(s)
  • [x] Parcellation smart chip
  • [x] show/hide parcellation toggle exists and works
  • [x] q is a shortcut to show/hide parcellation toggle
  • [x] info button exists and works
  • [x] info button shows desc, and link to KG
  • [ ] regional is fine :: select hOC1 right
  • [x] probabilistic map loads fine
  • [x] segmentation layer hides
  • [x] navigate to button exists, and works
  • [x] Open in KG button exists and works
  • [x] Description tabs exists and works
  • [x] Regional features tab exists and works
    • [x] Receptor density dataset exists and works
    • [x] Open in KG button exists and works
    • [x] Preview tab exists and works
    • [x] fingerprint is shown, interactable
    • [x] profiles can be loaded, interactable
  • [x] Connectivity tab exists and works
    • [x] on opening tab, PMap disappear, colour mapped segmentation appears
    • [x] on closing tab, PMap reappear, segmentation hides
  • [x] switching template/parc
  • [x] mni152 julich brain 29 (big brain) -> big brain julich brain 29
  • [x] big brain julich brain 29 (long bundle) -> (asks to change template)
  • [x] in big brain v2.9 (or latest)
  • [x] high res hoc1, hoc2, hoc3, lam1-6 are visible
  • [x] pli dataset link
    • [x] redirects fine
    • [x] shows fine
  • [x] fsaverage
  • [x] can be loaded & visible
• [x] Waxholm
  • [x] v4 are visible
  • [x] on hover, show correct region name(s)
  • [x] whole mesh loads

Pt Assignments

• [x] human MNI152 julich brain should work (statistical)
• [x] rat waxholm v4 should work (labelled)
• [x] csv can be downloaded
• [x] big brain & fsaverage shouldn't work

Download atlas

• [x] human MNI152 julich brain can be downloaded
• [x] human MNI152 julich brain hoc1 left can be downloaded
• [x] rat waxholm v4 can be downloaded

saneURL

• [x] saneurl generation functions properly
  • [x] try existing key (human), and get unavailable error
  • [x] try non existing key, and get available
  • [x] create use key x_tmp_foo and new url works
• [x] saneUrl redirects to big brain
• [x] saneUrl redirects to julich brain (colin 27)
• [x] saneUrl redirects to waxholm v4
• [x] saneUrl redirects to allen 2017
• [x] saneUrl redirects to monkey
• [x] saneUrl redirects to URL that contains annotations

VIP URL

• [x] vipUrl redirects to human mni152
• [x] vipUrl redirects mebrains
• [x] vipUrl redirects to waxholm v4
• [x] vipUrl redirects allen mouse 2017

plugins

• [x] jugex plugin works