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Fanghuachen / AEDNet

Source code for AEDNet paper from ACMMM 2022
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How to collect dataset in JASPAR? #2

Closed QinglinZhai closed 5 months ago

QinglinZhai commented 5 months ago

Hello, I noticed that you have collected 6 ChIP-seq datasets from the JASPAR database and they are labeled with detailed transcription factor binding sites. As I am new to this research, I would really like to know how you obtained the precise DNA sequence datasets related to the transcription factor binding sites, and whether there is any relevant code for me to refer to? Good luck and thanks!

Fanghuachen commented 3 weeks ago

Hello, I noticed that you have collected 6 ChIP-seq datasets from the JASPAR database and they are labeled with detailed transcription factor binding sites. As I am new to this research, I would really like to know how you obtained the precise DNA sequence datasets related to the transcription factor binding sites, and whether there is any relevant code for me to refer to? Good luck and thanks!

I think you reply to the wrong repository. The question you mentioned seems not related to our work.