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FePhyFoFum / phyx

phylogenetics tools for linux (and other mostly posix compliant) computers
blackrim.org
GNU General Public License v3.0
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pxlssq should recognize `standard` data #102

Closed josephwb closed 4 years ago

josephwb commented 5 years ago

E.g. morphological characters. At present defaults to DNA. Need to make use of get_alpha_name. 'Standard' data are stored with the MULTI alphabet. Will have to do a bit of work to gather the range of character identifiers used, but pretty straightforward.

josephwb commented 4 years ago

With ebf40c88da76e63b5cd1f1974f8d452fbe3337ea supports binary and arbitrarily coded standard (morphological) data. Also better handling of interleaved data. I've tested it pretty extensively, but will do a few more tomorrow and then close this.