Integration fingerprints and clustering

[JonasSchaub]

Work in progress!

[sonarcloud[bot]]

SonarCloud Quality Gate failed.   

3 Bugs
0 Vulnerabilities
0 Security Hotspots
183 Code Smells

No Coverage information
9.9% Duplication

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[JonasSchaub]

Bug: Fingerprint dimensionality 0 can be set ATM but this needs to be prohibited.

[JonasSchaub]

TODO: setting to choose molecule or fragment frequency for choosing the most frequent fragments for fingerprint is available in GUI but has no working functionality behind it yet.

[JonasSchaub]

Bug: Labelling of vigilance parameter buttons, mistake in "k-assignment"

[JonasSchaub]

TODO: Tidy up clustering view controller

[JonasSchaub]

TODO: overview view needs to be taken as module, not copied code. Some functionality has been turned off here, though.

[JonasSchaub]

TODO: overview view needs to be taken as module, not copied code. Some functionality has been turned off here, though.

e.g. the jumping

[JonasSchaub]

TODO: Can histogram be made into a module that is reused instead of copying code?

[JonasSchaub]

TODO: apply spotless for (hopefully) successful Gradle build

[JonasSchaub]

TODO: Look at SonarCloud quality gate failures (bugs, code duplications)

[JonasSchaub]

add default button to histogram view and its other usages within MORTAR.

[FelixBaensch]

Note: this PR points to main branch

[JonasSchaub]

Note: this PR points to main branch

Updated to production. I will deal with the conflicts when mergeing production into this branch before continuing the work here.

[JonasSchaub]

there is an "unnecessary" scroll bar at the bottom of the histogram view.