FelixKrueger / Bismark

A tool to map bisulfite converted sequence reads and determine cytosine methylation states
http://felixkrueger.github.io/Bismark/
GNU General Public License v3.0
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how do bismark deal with those softclip reads which could be alinged to a reference partially? #643

Closed feihongloveworld closed 11 months ago

FelixKrueger commented 11 months ago

well, soft-clipped portions of the read are ignored?