FelixKrueger / SNPsplit

Allele-specific alignment sorting
http://felixkrueger.github.io/SNPsplit/
GNU General Public License v3.0
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a naive question #16

Closed hmyh1202 closed 6 years ago

hmyh1202 commented 6 years ago

Could this software seperae Father source and Mother source sequenced reads from fertilized egg sample data?

FelixKrueger commented 6 years ago

If the mother and father have clearly defined SNP that separates them, such as a a cross of different mouse strains, I don't see why not.