Consider adding single-end/paired-end auto-detection

FelixKrueger / SNPsplit

Allele-specific alignment sorting

http://felixkrueger.github.io/SNPsplit/

GNU General Public License v3.0

52 stars 20 forks source link

Consider adding single-end/paired-end auto-detection #27

Closed FelixKrueger closed 4 years ago

FelixKrueger commented 4 years ago

It is quite easy to forget to specify --paired for paired-end files, so it would help to add a library strategy auto-detection, at least for the first file.