UnicodeEncodeError: 'ascii' codec can't encode character '\xb5' in position 2492: ordinal not in range(128)

[anoopsanal]

I am using Trimgalore 0.6.7 from galaxy environment and getting the following error, it would grateful if anyone can help me on this. Traceback (most recent call last): File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/lib/galaxy/jobs/runners/init.py", line 538, in _finish_or_resubmit_job self.sa_session.flush() File "", line 2, in flush File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/orm/session.py", line 3363, in flush self._flush(objects) File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/orm/session.py", line 3503, in _flush transaction.rollback(_capture_exception=True) File "/mnt/gpfs1/home/scgalaxy01/galaxy_2201/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/util/langhelpers.py", line 70, in exit compat.raise( File "/mnt/gpfs1/home/scgalaxy01/galaxy_2201/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/util/compat.py", line 207, in raise raise exception File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/orm/session.py", line 3463, in _flush flush_context.execute() File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/orm/unitofwork.py", line 456, in execute rec.execute(self) File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/orm/unitofwork.py", line 630, in execute util.preloaded.orm_persistence.save_obj( File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/orm/persistence.py", line 236, in save_obj _emit_update_statements( File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/orm/persistence.py", line 1000, in _emit_update_statements c = connection._execute_20( File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/engine/base.py", line 1614, in _execute_20 return meth(self, args_10style, kwargs_10style, execution_options) File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/sql/elements.py", line 325, in _execute_on_connection return connection._execute_clauseelement( File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/engine/base.py", line 1481, in _execute_clauseelement ret = self._execute_context( File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/engine/base.py", line 1845, in _execute_context self._handle_dbapi_exception( File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/engine/base.py", line 2030, in _handle_dbapiexception util.raise(exc_info[1], with_traceback=exc_info[2]) File "/mnt/gpfs1/home/scgalaxy01/galaxy_2201/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/util/compat.py", line 207, in raise raise exception File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/engine/base.py", line 1802, in _execute_context self.dialect.do_execute( File "/mnt/gpfs1/home/scgalaxy01/galaxy_22_01/galaxy/.venv/lib/python3.8/site-packages/sqlalchemy/engine/default.py", line 732, in do_execute cursor.execute(statement, parameters) UnicodeEncodeError: 'ascii' codec can't encode character '\xb5' in position 2492: ordinal not in range(128)

[FelixKrueger]

I am afraid I have no idea what is going here, it almost certainly is something you might want to raise with the Galaxy team instead.

[anoopsanal]

ok thanks

[anoopsanal]

ok thanks