search

FelixKrueger / TrimGalore

A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
GNU General Public License v3.0
469 stars 151 forks source link

--illumina default adapter trimming #6

Closed pvphaneuf closed 7 years ago

pvphaneuf commented 7 years ago

In the user guide, the Full list of options for Trim galore! documentation describes illumina's default adapter as GATCGGAAGAGC, which seems to be missing an initial 'A' in comparison to the default illumina adapter sequence described within the Adaptive quality and adapter trimming with Trim Galore! section.

FelixKrueger commented 7 years ago

Thanks for spotting this, I have now fixed this.