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FenTechSolutions / CausalDiscoveryToolbox

Package for causal inference in graphs and in the pairwise settings. Tools for graph structure recovery and dependencies are included.
https://fentechsolutions.github.io/CausalDiscoveryToolbox/html/index.html
MIT License
1.08k stars 198 forks source link

Problems installing R packages #127

Closed Angela446-lgtm closed 1 year ago

Angela446-lgtm commented 2 years ago

Does anybody know how to install the CAM package in R? - I found some difficulties trying to install it.

shahdhardn commented 2 years ago

Did you manage to solve this issue? If yes, please assist. Thanks.

diviyank commented 2 years ago

Hello, The CAM package is a bit tricky to install (mix of Bioconductor version that should be correct + other packages) Please use the docker image otherwise.

Best, Diviyan

Angela446-lgtm commented 2 years ago

Hi, From http://cran.nexr.com/web/packages/CAM/index.html, I downloaded the CAM_1.0.tar.gz and imported it to R. it worked for me.

Best, Angela

MAX00008888 commented 2 years ago

Hi, From http://cran.nexr.com/web/packages/CAM/index.html, I downloaded the CAM_1.0.tar.gz and imported it to R. it worked for me.

Best, Angela

hello, I want to ask how to imported CAM into R @Angela446-lgtm

diviyank commented 1 year ago

Hello, I updated the docker installation scripts for debian and ubuntu distributions, for R 4.2.1, please check here, it might give you commands to execute on your device :

Debian : https://github.com/FenTechSolutions/base-docker-images/blob/main/cdt-env.dockerfile Ubuntu : https://github.com/FenTechSolutions/base-docker-images/blob/main/nv-cdt-env.dockerfile

This executes without any issues on CircleCI !

Hope this helps, Best regards, Diviyan

diviyank commented 1 year ago

I will close this issue, please open a new one @MAX00008888 if you still encounter some issues