Closed mumdark closed 1 month ago
Hey @mumdark, since score corresponds to the Euclidean distance between the observed pattern and template, the lowest distance is ranked highest. The ideal score would be 0, corresponding to the observed pattern matching the template fully.
closing as answered.
Hello,
I used the following code to find genes associated with each pattern, which returns a dictionary containing lists of marker genes, their
ranking
, and theirscore
for each pattern.The issue I'm facing is that for Pattern1, the gene RNF223 is ranked first in
PatternRanks
, but it has the lowest score inPatternScores
, as shown below:Isn't it expected that genes with higher rankings should have higher scores?
Looking forward to your response.