hello! I am trying to run gene enrichment and I can't find the argument in calcCoGAPSStat that would accept a gene list. Any advice would be appreciated!
Here is the documentation from the CoGAPS package
Usage
calcCoGAPSStat(
object,
sets = NULL,
whichMatrix = "featureLoadings",
numPerm = 1000,
...
)
hello! I am trying to run gene enrichment and I can't find the argument in calcCoGAPSStat that would accept a gene list. Any advice would be appreciated! Here is the documentation from the CoGAPS package Usage calcCoGAPSStat( object, sets = NULL, whichMatrix = "featureLoadings", numPerm = 1000, ... )