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FertigLab / CoGAPS

Bayesian MCMC matrix factorization algorithm
https://www.bioconductor.org/packages/release/bioc/html/CoGAPS.html
BSD 3-Clause "New" or "Revised" License
61 stars 17 forks source link

fix the check for semi supervised case #76

Open dimalvovs opened 11 months ago

dimalvovs commented 11 months ago

Here is a comment left by someone in the code, let's treat it properly here. 

# TODO: fix this check for semisupervised case
    #  if (sum(object@featureLoadings < 0) > 0 | sum(object@loadingStdDev < 0) > 0)
     #       "negative values in feature Matrix"
      #  if (sum(object@sampleFactors < 0) > 0 | sum(object@factorStdDev < 0) > 0)
       #     "negative values in sample Matrix"