Medical Diffusion: This repository contains the code to our paper Medical Diffusion: Denoising Diffusion Probabilistic Models for 3D Medical Image Synthesis
Hello,
After working through a few issues, I now have an error regarding the format of the brats dataset:
FileNotFoundError: No such file or no access: '/.......aTS2020_TrainingData/MICCAI_BraTS2020_TrainingData/BraTS20_Training_001/BraTS20_Training_001_flair.nii.gz'
The data is there, 33gb of training data. However, the files are not .gz They are simply in the format "BraTS20_Training_001_flair.nii"
YongpeiZhu
commented
1 year ago
Hello, After working through a few issues, I now have an error regarding the format of the brats dataset: FileNotFoundError: No such file or no access: '/.......aTS2020_TrainingData/MICCAI_BraTS2020_TrainingData/BraTS20_Training_001/BraTS20_Training_001_flair.nii.gz'
The data is there, 33gb of training data. However, the files are not .gz They are simply in the format "BraTS20_Training_001_flair.nii"
This Brats data was downloaded from https://www.kaggle.com/datasets/awsaf49/brats2020-training-data
Is there a way to specify that the data is not in a .gz, but in the binary format provided by the repository?