With larval ovary and larval testis being classified as gonad, that term cannot remain mapped to its Uberon counterpart: the mapping ultimately results in larval ovary and ovary being considered equivalent upon merging FBbt and Uberon, because in Uberon ovary itself is equivalent to gonad and part_of some 'female reproductive system'. This violates the disjonction between larval and ovary structures that we have in FBbt, and thus causes ~200 unsatisfiable classes upon merging Uberon and FBbt (all classes related to the larval ovary, including the adult ovary which is said to develops_from the larval ovary).
Likewise for larval testis and testis.
The easiest solution is to unmap FBbt’s gonad from Uberon’s gonad. The two terms do not have compatible definitions anyway: the FBbt term is “the organ of the reproductive system in which the germ cells reside”, whereas the Uberon term is “the reproductive organ that produces and releases eggs or sperm” -- the Uberon term clearly refers to mature gonads only, whereas the FBbt term does not have this restriction.
The sex-specific terms ovary and testis are still properly mapped, so the loss of information is minimal.
With
larval ovaryandlarval testisbeing classified asgonad, that term cannot remain mapped to its Uberon counterpart: the mapping ultimately results inlarval ovaryandovarybeing considered equivalent upon merging FBbt and Uberon, because in Uberonovaryitself is equivalent togonad and part_of some 'female reproductive system'. This violates the disjonction between larval and ovary structures that we have in FBbt, and thus causes ~200 unsatisfiable classes upon merging Uberon and FBbt (all classes related to the larval ovary, including the adult ovary which is said to develops_from the larval ovary).Likewise for
larval testisandtestis.The easiest solution is to unmap FBbt’s
gonadfrom Uberon’sgonad. The two terms do not have compatible definitions anyway: the FBbt term is “the organ of the reproductive system in which the germ cells reside”, whereas the Uberon term is “the reproductive organ that produces and releases eggs or sperm” -- the Uberon term clearly refers to mature gonads only, whereas the FBbt term does not have this restriction.The sex-specific terms
ovaryandtestisare still properly mapped, so the loss of information is minimal.