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New Term Request: oviDN input neurons #1853

Closed admclachlan closed 1 month ago

admclachlan commented 1 month ago

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FBrf0257087

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Had a few mapping questions from this paper. Most splits are straightforward but a few seem to be only linked to hemibrain bodyIds in the paper, and those don't seem to have types. Could you check the 'ontology notes' column?

combo DBD(short) AD(short) unmapped bodyids notes Ontology Notes
SS69920 VT064568 R14D05 A oviposition excitatory neuron        
SS69913 R26D04 VT050229 A oviposition excitatory neuron SMP550   stochastic Could SMP550  be a oviEN?
SS69542 VT043700 R34F03 A   PAL02     PAL02 is not in the ontology, but I don't see much of a description in this paper either
SS69540 VT033614 R34F03 A   PAL02     PAL02 is not in the ontology, but I don't see much of a description in this paper either
SS66793 VT002057 VT040569 A adult superior lateral protocerebrum neuron 212        
SS66794 VT002057 VT002857 A adult superior lateral protocerebrum neuron 212        
SS65423 VT026035 VT026347 A oviposition inhibitory neuron        
SS65424 VT010054 VT027273 A oviposition inhibitory neuron        
SS65422 VT010054 R68A10 A oviposition inhibitory neuron        
SS64946 VT002223 VT017683 A   group B 671618401   body ID doesn’t seem to have a type?
SS64927 VT017683 VT028555 A   group B 422328492   body ID doesn’t seem to have a type?
SS45323 VT016254 VT019330 A adult superior medial protocerebrum neuron 094        
SS45323 VT016254 VT019330 A adult superior medial protocerebrum neuron 602        
SS69514 VT008660 VT027104 A adult superior medial protocerebrum neuron 094        
SS69514 VT008660 VT027104 A adult superior medial protocerebrum neuron 602        
SS69457 R55D08 VT008660 A adult superior medial protocerebrum neuron 094        
SS69457 R55D08 VT008660 A adult superior medial protocerebrum neuron 602        
SS69505 VT005534 VT008474 A   group T 704816317, 1629383757   body ID doesn’t seem to have a type?
SS69429 VT045575 VT039470 A adult crepine neuron 039        
SS66864 VT022246 VT024647 A adult superior medial protocerebrum neuron 029        
SS54798 VT020732 VT017683 A adult fruitless aDT-h neuron | subset        
Clare72 commented 1 month ago

Could SMP550 be a oviEN?

It is possible, but far from clear in this paper.

AFAIK there is no mapping or description of the PAL01, 02 etc types anywhere, so just have to go with parent class ('dopaminergic PAL neuron').

I think your guess is as good as mine as to what 'group B' and 'group T' neurons are - there doesn't seem to be any description of them aside from connectivity, so not really possible to make terms.

admclachlan commented 1 month ago

Thanks for confirming that Clare.