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FlyBase / drosophila-anatomy-developmental-ontology

The home of the Drosophila anatomy ontology
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Hard coded overlaps-part of chain should be moved to RO #591

Closed matentzn closed 4 years ago

matentzn commented 5 years ago

Currently in fbbt-edit.obo:

[Typedef]
id: overlaps
name: overlaps
xref: RO:0002131
transitive_over: part_of ! part_of
dosumis commented 5 years ago

Thought we'd cleaned up all Typedef axioms in FBbt apart from id, name, xref.

matentzn commented 5 years ago

We removed it, but then many inferences got lost; Its easy to remove, but dont you want to be sure that it comes in from RO first before we get rid of it? :P I dont mind either way.

dosumis commented 5 years ago

Sorry - had forgotten that. It absolutely needs to be in RO. Quite shocking it's not.

matentzn commented 5 years ago

Does the obo syntax correspond to overlaps o part of subroleof: overlaps?

matentzn commented 5 years ago

(OBO syntax question sorry :P should know these things; just wanna be sure.

matentzn commented 5 years ago

Moved https://github.com/oborel/obo-relations/issues/330

matentzn commented 5 years ago

We need to remember to remove this once RO has had a new release