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ForwardSimulation
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forrustts
Forward time simulation, rust, and tree sequences.
https://docs.rs/forrustts
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Expand the trees API
#115
Closed
molpopgen
closed
3 years ago
molpopgen
commented
3 years ago
[x] TreeSequence list of samples
[x] TreeSequence::new method for a list of samples (useful when node flags not used).
[x] TreeSequence should error out when tables are not indexed.
[x] Calculate number of trees when initializing a tree sequence
[x] TreeSequence init should validate tables by default.
[x] Add TreeSequence::simplify.
[x] Preorder node traversal of a tree
[x] The various "node iterators" a la tskit-rust.
[x] Replace
panic!
and (most)
assert!
with proper error propagation to
ForrusttsError
.
[x] Add
TreesError
as a
from
to
ForrusttsErrror
.
[x] TreeSeq::new_with_samples should validate sample lists.
panic!
and (most)assert!
with proper error propagation toForrusttsError
.TreesError
as afrom
toForrusttsErrror
.