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ForwardSimulation / forrustts

Forward time simulation, rust, and tree sequences.
https://docs.rs/forrustts
MIT License
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Update tskit requirement from 0.7.0 to 0.9.0 #195

Closed dependabot[bot] closed 1 year ago

dependabot[bot] commented 2 years ago

Updates the requirements on tskit to permit the latest version.

Release notes

Sourced from tskit's releases.

New NodeFlags pub fn. Doc improvements.

2022-06-20, Version 0.9.0

Commits

  • [068fdccdea] Bump version to 0.9.0 (Kevin R. Thornton)
  • [d700af7294] doc sorting requirements (#243) (Kevin R. Thornton)
  • [6114d2bd65] Change ffi to private visibility. (#241) (Kevin R. Thornton)
  • [b53105112a] Add new_sample and is_sample to NodeFlags public API. (#238) (Kevin R. Thornton)
Changelog

Sourced from tskit's changelog.

2022-06-20, Version 0.9.0

Commits

  • [068fdccdea] Bump version to 0.9.0 (Kevin R. Thornton)
  • [d700af7294] doc sorting requirements (#243) (Kevin R. Thornton)
  • [6114d2bd65] Change ffi to private visibility. (#241) (Kevin R. Thornton)
  • [b53105112a] Add new_sample and is_sample to NodeFlags public API. (#238) (Kevin R. Thornton)

2022-05-26, Version 0.8.1

Commits

  • [bd72b689ac] Bump version to 0.8.1 (molpopgen)
  • [b0abdfad5c] impl TryFrom for TreeSequence (#236) (Kevin R. Thornton)
  • [71e927a9bb] TreeSequence::new now takes ownership of the TableCollection. (#235) (Kevin R. Thornton)

2022-05-24, Version 0.8.0

Commits

  • [e463302ced] Bump package version to 0.8.0 (molpopgen)
  • [deffc58127] Replace From for usize with TryFrom. (#234) (Kevin R. Thornton)
  • [a7c04213a1] update to CAPI 1.0.0 (#229) (Kevin R. Thornton)
  • [7c0b6169a3] Add CI for 32 bit Linux builds (#232) (Kevin R. Thornton)
  • [7458d85163] Invoke rust dependency caching after setting up rustc (#233) (Kevin R. Thornton)
  • [203a43a0e8] Only run CI for rust/stable. (#231) (Kevin R. Thornton)
  • [fb2128c0a5] Add dependency caching for CI. (#230) (Kevin R. Thornton)
  • [aff053c786] Improvements to handling of tsk_flags_t: (#227) (Kevin R. Thornton)
  • [5f558cb051] Audit pedantic lints re: integer casts (#223) (Kevin R. Thornton)
  • [609546185c] Fix several "pedantic" lints from clippy: (#222) (Kevin R. Thornton)

2022-03-24, Version 0.7.0

Commits

  • [8427c2fea7] Change order of generics to match argument order for all "add" (#221) (Kevin R. Thornton)
  • [6ef0406731] Fix typo in docstring for TableCollection::full_sort. (#219) (Kevin R. Thornton)
  • [a1a7e12208] Add TableCollection::topological_sort_individuals. (#218) (Kevin R. Thornton)
  • [4c17ca62a2] Update clap requirement from ~3.0.0 to ~3.1.3 (#215) (dependabot[bot])
  • [f40562a56a] Fix lint found by clippy. (#216) (Kevin R. Thornton)
  • [4efddb6f5d] Update clap requirement from ~2.34.0 to ~3.0.0 (#214) (dependabot[bot])

2021-12-15, Version 0.7.0-alpha.1

Fixes various minor issues with the first alpha.

Commits

  • [44965969c0] Bump version to 0.7.0.alpha.1 (molpopgen)
  • [5d6a289490] Fix issues with Time, Position, Location newtypes (#212) (Kevin R. Thornton)
  • [99930e8bb0] Add explicit tests of tree roots. (#211) (Kevin R. Thornton)

... (truncated)

Commits


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molpopgen commented 2 years ago

@dependabot rebase

dependabot[bot] commented 2 years ago

Looks like this PR is already up-to-date with main! If you'd still like to recreate it from scratch, overwriting any edits, you can request @dependabot recreate.

dependabot[bot] commented 1 year ago

Superseded by #201.