Open notmaurox opened 2 years ago
I am trying to process samples and get GCT scores in the excel output file.
I think the issue comes from this line:
https://github.com/FoxoTech/methylcheck/blob/e3f4a7468176873a83f05cbed45185c146d6f24b/methylcheck/reports/bead_array.py#L638
If I comment it out; GCT scores appear in the excel output. I think you might want to check np.isnan(v) is True instead of np.isnan(v) is False
np.isnan(v) is True
np.isnan(v) is False
Cheers, Mauro
I am trying to process samples and get GCT scores in the excel output file.
I think the issue comes from this line:
https://github.com/FoxoTech/methylcheck/blob/e3f4a7468176873a83f05cbed45185c146d6f24b/methylcheck/reports/bead_array.py#L638
If I comment it out; GCT scores appear in the excel output. I think you might want to check
np.isnan(v) is Trueinstead ofnp.isnan(v) is FalseCheers, Mauro