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FoxoTech / methylprep

Python-based preprocessing software for Illumina methylation arrays
MIT License
33 stars 14 forks source link

incorp Mauro's updates (pNegECDF and infer switch) into v1.7.0 #112

Closed marcmaxson closed 2 years ago

codecov[bot] commented 2 years ago

Codecov Report

Merging #112 (17f4f43) into feature/v1.7.0 (efc5db0) will increase coverage by 1.99%. The diff coverage is 50.81%.

@@                Coverage Diff                 @@
##           feature/v1.7.0     #112      +/-   ##
==================================================
+ Coverage           72.95%   74.94%   +1.99%     
==================================================
  Files                  33       33              
  Lines                3675     3732      +57     
==================================================
+ Hits                 2681     2797     +116     
+ Misses                994      935      -59
Flag Coverage Δ
unittests 74.94% <50.81%> (+1.99%) :arrow_up:

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
methylprep/download/miniml.py 48.36% <0.00%> (+0.62%) :arrow_up:
methylprep/processing/p_value_probe_detection.py 68.08% <7.14%> (-25.86%) :arrow_down:
methylprep/download/geo.py 63.67% <54.02%> (+9.18%) :arrow_up:
methylprep/processing/pipeline.py 85.18% <55.55%> (+0.48%) :arrow_up:
methylprep/files/sample_sheets.py 78.83% <60.00%> (-0.58%) :arrow_down:
methylprep/download/process_data.py 74.34% <100.00%> (+4.80%) :arrow_up:
methylprep/processing/infer_channel_switch.py 100.00% <100.00%> (ø)
... and 2 more

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