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FoxoTech / methylprep

Python-based preprocessing software for Illumina methylation arrays
MIT License
33 stars 14 forks source link

download support TAR of BED files too #90

Open marcmaxson opened 3 years ago

marcmaxson commented 3 years ago

test with https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE135770

marcmaxson commented 3 years ago

TAR of BED files -- turns out to be a non methylation array, but should give warning to user in this case

useful for the "pull and process only controls" in dataset option -- should have 280 controls: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE163970