Traceback (most recent call last):
File "/people/disk2/magnus/programs/python/bin/fragit", line 28, in
main()
File "/people/disk2/magnus/programs/python/lib/python2.7/site-packages/fragit/cmdline.py", line 170, in main
out.writeFile(outfile)
File "/people/disk2/magnus/programs/python/lib/python2.7/site-packages/fragit/xyzmfcc.py", line 141, in writeFile
ss = self._fragment_xyz( capped_fragment )
File "/people/disk2/magnus/programs/python/lib/python2.7/site-packages/fragit/xyzmfcc.py", line 127, in _fragment_xyz
(x,y,z) = calculate_hydrogen_position( heavy_atom, atom )
File "/people/disk2/magnus/programs/python/lib/python2.7/site-packages/fragit/util.py", line 387, in calculate_hydrogen_position
alpha = table[heavy.GetAtomicNum()]
KeyError: 16
Traceback (most recent call last): File "/people/disk2/magnus/programs/python/bin/fragit", line 28, in
main()
File "/people/disk2/magnus/programs/python/lib/python2.7/site-packages/fragit/cmdline.py", line 170, in main
out.writeFile(outfile)
File "/people/disk2/magnus/programs/python/lib/python2.7/site-packages/fragit/xyzmfcc.py", line 141, in writeFile
ss = self._fragment_xyz( capped_fragment )
File "/people/disk2/magnus/programs/python/lib/python2.7/site-packages/fragit/xyzmfcc.py", line 127, in _fragment_xyz
(x,y,z) = calculate_hydrogen_position( heavy_atom, atom )
File "/people/disk2/magnus/programs/python/lib/python2.7/site-packages/fragit/util.py", line 387, in calculate_hydrogen_position
alpha = table[heavy.GetAtomicNum()]
KeyError: 16