I uploaded the i2b2 2014 data set (that is, the 2 training sets and the 1 test set per the readme). After turning this to the BRAT format and putting the train, test, valid folders all into 1 data set, I've gone ahead and run the NeuroNer like so:
The code managed to run without any errors and gave me the summary statistics, I just don't understand how I can obtain the model f1 score. Am I missing something?
I uploaded the i2b2 2014 data set (that is, the 2 training sets and the 1 test set per the readme). After turning this to the BRAT format and putting the train, test, valid folders all into 1 data set, I've gone ahead and run the NeuroNer like so:
The code managed to run without any errors and gave me the summary statistics, I just don't understand how I can obtain the model f1 score. Am I missing something?