Question for INVADEseq.py about the dictory of genus.

FredHutch / Galeano-Nino-Bullman-Intratumoral-Microbiota_2022

Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022

MIT License

33 stars 10 forks source link

Question for INVADEseq.py about the dictory of genus. #21

Open yang050036 opened 2 months ago

yang050036 commented 2 months ago

Hi, The script is excellent! However, I don't understand the lines from 52 to 54 in INVADEseq.py regarding the 'unclassified' target. Why is there an 'unclassified' target specified?