FredHutch / VISCtemplates

Tools for writing reproducible reports at VISC
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Make sure R packages leveraged using :: notation are included in reproducibility table #211

Open kelliemac opened 1 month ago

kelliemac commented 1 month ago

Currently R packages leveraged using :: notation are NOT included in the reproducibility table - only packages loaded with library() calls are included. We need to fix this.

Maybe we can leverage functionality from renv to scrape relevant files for :: usage?

This is mentioned in discussion on https://github.com/FredHutch/VISCtemplates/issues/35, but I'm making a separate issue for it because it's a spinoff from the original issue which is about using full renv functionality.