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FredHutch / easybuild-life-sciences

Howto and implementation documentation
https://fredhutch.github.io/easybuild-life-sciences/
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Request to install Clairvoyante #171

Closed scottsisco closed 5 years ago

scottsisco commented 5 years ago

Ticket: 183193

Original Message: Can I have Clairvoyante installed? Here is the GitHub link: https://github.com/aquaskyline/Clairvoyante

Thanks!

GitHub - aquaskyline/Clairvoyante: Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing The installation of the blosc library might fail if your CPU doesn't support the AVX2 instruction set. Alternatively, you can compile and install from the latest source code available in GitHub with the "DISABLE_BLOSC_AVX2" environment variable set.. Clairvoyante was written in Python2 (tested on Python 2.7.10 in Linux and Python 2.7.13 in MacOS). github.com

scottsisco commented 5 years ago

@fizwit Did you already install this? We have another request for it in ticket 194147. However, I can load the module on our servers with

ml Clairvoyante

fizwit commented 5 years ago

module built: Clairvoyante/1.02-foss-2016b-Python-3.6.6 customer notified ticket closed