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FredHutch / easybuild-life-sciences

Howto and implementation documentation
https://fredhutch.github.io/easybuild-life-sciences/
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build fred hutch Python with new name fhPython #384

Closed fizwit closed 4 years ago

fizwit commented 4 years ago

Step One build dependencies 

/app/modules/all/fontconfig/2.13.92-GCCcore-9.3.0.lua
/app/modules/all/Mako/1.1.2-GCCcore-9.3.0.lua
/app/modules/all/LLVM/9.0.1-GCCcore-9.3.0.lua
/app/modules/all/GLib/2.64.1-GCCcore-9.3.0.lua
/app/modules/all/intltool/0.51.0-GCCcore-9.3.0.lua
/app/modules/all/X11/20200222-GCCcore-9.3.0.lua
/app/modules/all/libdrm/2.4.100-GCCcore-9.3.0.lua
/app/modules/all/Mesa/20.0.2-GCCcore-9.3.0.lua
/app/modules/all/libGLU/9.0.1-GCCcore-9.3.0.lua
/app/modules/all/Tk/8.6.10-GCCcore-9.3.0.lua
/app/modules/all/HDF5/1.10.6-gompi-2020a.lua
/app/modules/all/Szip/2.1.1-GCCcore-9.3.0.lua
/app/modules/all/Doxygen/1.8.17-GCCcore-9.3.0.lua
/app/modules/all/netCDF/4.7.4-gompi-2020a.lua
/app/modules/all/JasPer/2.0.14-GCCcore-9.3.0.lua
/app/modules/all/ICU/66.1-GCCcore-9.3.0.lua
/app/modules/all/BamTools/2.5.1-GCC-9.3.0.lua
/app/modules/all/Eigen/3.3.7-GCCcore-9.3.0.lua
/app/modules/all/Qt5/5.14.1-GCCcore-9.3.0.lua
/app/modules/all/DBus/1.13.12-GCCcore-9.3.0.lua
/app/modules/all/NSS/3.51-GCCcore-9.3.0.lua
/app/modules/all/NSPR/4.25-GCCcore-9.3.0.lua
/app/modules/all/BEDTools/2.29.2-GCC-9.3.0.lua
/app/modules/all/libevent/2.1.11-GCCcore-9.3.0.lua
/app/modules/all/Pysam/0.16.0.1-GCC-9.3.0.lua
/app/modules/all/libxslt/1.1.34-GCCcore-9.3.0.lua
/app/modules/all/Tkinter/3.8.2-GCCcore-9.3.0.lua
/app/modules/all/matplotlib/3.2.1-foss-2020a-Python-3.8.2.lua
/app/modules/all/pybedtools/0.8.1-foss-2020a.lua
/app/modules/all/MUMmer/4.0.0beta2-foss-2020a.lua
/app/modules/all/numexpr/2.7.1-foss-2020a-Python-3.8.2.lua
/app/modules/all/LZO/2.10-GCCcore-9.3.0.lua
/app/modules/all/Blosc/1.17.1-GCCcore-9.3.0.lua
/app/modules/all/PyTables/3.6.1-foss-2020a-Python-3.8.2.lua
/app/modules/all/PostgreSQL/12.3-GCCcore-9.3.0-Python-3.8.2.lua
/app/modules/all/pkgconfig/1.5.1-GCCcore-9.3.0-Python-3.8.2.lua
/app/modules/all/OpenJPEG/2.3.1-GCCcore-9.3.0.lua
/app/modules/all/ZeroMQ/4.3.2-GCCcore-9.3.0.lua
/app/modules/all/OpenPGM/5.2.122-GCCcore-9.3.0.lua
/app/modules/all/libsodium/1.0.18-GCCcore-9.3.0.lua
/app/modules/all/libyaml/0.2.2-GCCcore-9.3.0.lua
/app/modules/all/PyYAML/5.3-GCCcore-9.3.0.lua
/app/modules/all/dask/2.18.1-foss-2020a-Python-3.8.2.lua
/app/modules/all/Pandoc/2.10.lua
/app/modules/all/scikit-learn/0.23.1-foss-2020a-Python-3.8.2.lua
/app/modules/all/h5py/2.10.0-foss-2020a-Python-3.8.2.lua
/app/modules/all/igraph/0.8.2-foss-2020a.lua
/app/modules/all/awscli/1.18.89-GCCcore-9.3.0-Python-3.8.2.lua
/app/modules/all/Meson/0.53.2-GCCcore-9.3.0-Python-3.8.2.lua
/app/modules/all/Ninja/1.10.0-GCCcore-9.3.0.lua
/app/modules/all/libglvnd/1.2.0-GCCcore-9.3.0.lua
/app/modules/all/pybind11/2.4.3-GCCcore-9.3.0-Python-3.8.2.lua
/app/modules/all/SciPy-bundle/2020.03-foss-2020a-Python-3.8.2.lua
/app/modules/all/libunwind/1.3.1-GCCcore-9.3.0.lua
/app/modules/all/re2c/1.3-GCCcore-9.3.0.lua
/app/modules/all/PCRE2/10.34-GCCcore-9.3.0.lua
/app/modules/all/double-conversion/3.1.5-GCCcore-9.3.0.lua
/app/modules/all/JupyterLab/2.2.5-foss-2020a-Python-3.8.2.lua
/app/modules/all/IPython/7.15.0-foss-2020a-Python-3.8.2.lua
/app/modules/all/freetds/1.2-GCCcore-9.3.0.lua
/app/modules/all/snappy/1.1.8-GCCcore-9.3.0.lua
/app/modules/all/numba/0.50.0-foss-2020a-Python-3.8.2.lua
/app/modules/all/unixODBC/2.3.7-foss-2020a.lua
/app/modules/all/bokeh/2.0.2-foss-2020a-Python-3.8.2.lua
/app/modules/all/lz4/1.9.2-GCCcore-9.3.0.lua
/app/modules/all/zstd/1.4.4-GCCcore-9.3.0.lua
/app/modules/all/gzip/1.10-GCCcore-9.3.0.lua
fizwit commented 4 years ago

fhPython/3.8.2-foss-2020a-Python-3.8.2