FredHutch / easybuild-life-sciences

Howto and implementation documentation
https://fredhutch.github.io/easybuild-life-sciences/
21 stars 6 forks source link

Dependency for Trinity #478

Closed alisoncg24 closed 3 years ago

alisoncg24 commented 3 years ago

Hi - Trinity which is available on the server lacks the correct version of salmon. Trinity requires salmon 0.9.1. Currently Trinity must be run in no-salmon mode as Salmon 1.2.0 produces an error.

fizwit commented 3 years ago

Installed and available: Trinity/2.10.0-foss-2019b-Python-3.7.4 This new module loads the dependencies Salmon/1.1.0, Jellyfish/2.3.0, and kallisto/0.46.1 You only need to load Trinity now,