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FredHutch / easybuild-life-sciences

Howto and implementation documentation
https://fredhutch.github.io/easybuild-life-sciences/
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deeptools 3.5.1-foss-2021b missing dependency #523

Closed alisoncg24 closed 2 years ago

alisoncg24 commented 2 years ago

trying to use plotheatmap in terminal with 3.5.1 delivers the following error: ImportError: /app/software/GCCcore/8.3.0/lib64/libstdc++.so.6: version `GLIBCXX_3.4.29' not found (required by /app/software/matplotlib/3.4.3-foss-2021b/lib/python3.9/site-packages/matplotlib/_path.cpython-39-x86_64-linux-gnu.so)

trying to use plotheatmap in terminal with 3.3.1/2019b delivers the following error: ImportError: cannot import name '_imaging' from 'PIL' (/app/software/Pillow/8.3.2-GCCcore-11.2.0/lib/python3.9/site-packages/PIL/init.py) unless you module purge then load deeptools 3.3.1

(thanks for making this new version! Hopefully this is an easy fix!)

fizwit commented 2 years ago

Please check the modules you have loaded. All modules need to be in the same toolchain "foss-2021b" for example. You have something loaded which is interfering with deeptools. Try using deeptools by itself with no other modules loaded.