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FredHutch / easybuild-life-sciences

Howto and implementation documentation
https://fredhutch.github.io/easybuild-life-sciences/
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Module Request: Updated AlphaFold + AlphaPulldown #547

Closed crownedeagle closed 5 months ago

crownedeagle commented 11 months ago

Hello, I would like to request the addition of environment modules for AlphaFold version 2.3.0 (https://github.com/google-deepmind/alphafold/releases/tag/v2.3.0) and AlphaPulldown version 0.30.7 (https://github.com/KosinskiLab/AlphaPulldown/releases/tag/0.30.7), which is dependent on the requested version of AlphaFold.

My lab is interested in using these programs to screen for and evaluate protein-protein interactions in silico, and I would not be surprised if other labs also become interested in this application of AlphaFold in the relatively near future.

Thank you, -Nelson

fizwit commented 5 months ago

module load AlphaFold/2.3.1-foss-2022a-CUDA-11.7.0