This PR re-performs the annotation review incorporating the filtering steps.
The plots are also better annotated with how many data points are there and some ggpubr stats.
Had to add some code to 03-annotate.R so that it utilizes the filtering data to subset the annotation df.
Also made a couple of edits to 02-filter.R (removed an erroneous comma and filtered out some code that just wasn't happy -- will work on fixing these in another PR)
This PR re-performs the annotation review incorporating the filtering steps.
The plots are also better annotated with how many data points are there and some
ggpubrstats.Had to add some code to
03-annotate.Rso that it utilizes the filtering data to subset the annotation df.Also made a couple of edits to
02-filter.R(removed an erroneous comma and filtered out some code that just wasn't happy -- will work on fixing these in another PR)