Issue with SECOM functions; Updates to DescTools::Winsorize

FrederickHuangLin / ANCOMBC

Differential abundance (DA) and correlation analyses for microbial absolute abundance data

https://www.nature.com/articles/s41467-020-17041-7

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Issue with SECOM functions; Updates to DescTools::Winsorize #290

Closed bpark67 closed 4 weeks ago

bpark67 commented 4 weeks ago

I have noticed there is an issue with running the secom_linear and secom_dist functions due to an update to the DescTools::Winsorize function. It seems the Winsorize function was defined using different parameters.

For now, I am working around by downgrading the DescTools package to the 0.99.54 version.

FrederickHuangLin commented 4 weeks ago

Hi @bpark67,

We have corrected this issue in its devel version under "bug-fix" branch. The formal update will be released in the next few weeks.

Best,