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Freevini / Metagenomics_pipeline

Metagenomic analysis pipeline for the BMC Microbiology paper 2019
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check the rawReads file #44

Closed Freevini closed 6 years ago

Freevini commented 6 years ago

In the raw_reads_cottens.fasta seem to be above 400'000 reads however in the most bamqcs there are ca. 380'000 reads mention...is this due to the standard rq>=0.7 quality filter.

Freevini commented 6 years ago

Have to do reads quality plot anyway