run_alphafold.py kill when running big complex

FreshAirTonight / af2complex

Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.

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run_alphafold.py kill when running big complex #24

Open dantekey opened 7 months ago

dantekey commented 7 months ago

Hi,

The process is automatically killed when I predicted a complex with 3000 or longer aa. But there was no problem when I use alphafold2-multimer. Could you please give me some suggestions for resolving this error?

FreshAirTonight commented 7 months ago

try

--save_recycled=0 --mono_msa_crop_size=2000