SETTINGS FOR: plot (version: 0.1.2.dev88+g931f49c)
input: [PosixPath('final.molecule_stats.filtered.tsv'), PosixPath('barcodes.clstr')]
output_dir: figures
Traceback (most recent call last):
File "/home/phojer/miniconda3/envs/blr-ema/bin/blr", line 8, in <module>
sys.exit(main())
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/site-packages/blr/__main__.py", line 45, in main
module.main(args)
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/site-packages/blr/cli/plot.py", line 47, in main
proc_func(files, args.output_dir, summary)
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/site-packages/blr/cli/plot.py", line 115, in process_molecule_stats
plot_molecule_stats(data, directory)
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/site-packages/blr/cli/plot.py", line 129, in plot_molecule_stats
with Plot("Molecule length histogram", output_dir=directory, figsize=SIZE_WIDE) as (fig, ax):
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/site-packages/blr/cli/plot.py", line 213, in __init__
self.fig, self.ax = plt.subplots(figsize=figsize)
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/site-packages/matplotlib/pyplot.py", line 1209, in subplots
fig = figure(**fig_kw)
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/site-packages/matplotlib/pyplot.py", line 545, in figure
**kwargs)
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/site-packages/matplotlib/backend_bases.py", line 3252, in new_figure_manager
return cls.new_figure_manager_given_figure(num, fig)
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/site-packages/matplotlib/backends/_backend_tk.py", line 950, in new_figure_manager_given_figure
window = tk.Tk(className="matplotlib")
File "/home/phojer/miniconda3/envs/blr-ema/lib/python3.6/tkinter/__init__.py", line 2023, in __init__
self.tk = _tkinter.create(screenName, baseName, className, interactive, wantobjects, useTk, sync, use)
_tkinter.TclError: couldn't connect to display "localhost:10.0"
Error message
Seems to be related to this: https://stackoverflow.com/questions/50204556/tkinter-tclerror-couldnt-connect-to-display-localhost10-0-when-using-wordc