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G3viz / g3viz

Lollipop-diagram to interactively visualize genetic mutations
https://g3viz.github.io/g3viz/
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Adding variant classifications #11

Open ytakemon opened 3 years ago

ytakemon commented 3 years ago

Hello,

I am using readMAF to read in a csv file from the latest CCLE mutation files and noticed there were two classes that are not currently classified: Stop_Codon_Del, Stop_Codon_Ins (see warning message below).

Would it be possible to add these in the next release?

Warning message:
In mapMutationTypeToMutationClass(maf.df[, variant.class.col], mutation.type.to.class.df) :
  Unknown variant classification: Stop_Codon_Del, Stop_Codon_Ins,

Best, Yuka