GATB / short_read_connector

Short Read Connector (SRC)
GNU Affero General Public License v3.0
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Deal with boolean vectors #4

Closed pierrepeterlongo closed 7 years ago

pierrepeterlongo commented 7 years ago
  1. Include the https://github.com/pierrepeterlongo/commet/blob/master/src/extract_reads.cpp tool in order to extract reads from .bv files.

  2. Provide to way to create a .bv from a SRC counter or linker output. This would allow the creation of .bv files varying the threshold without the need to re-launch the whole process.

pierrepeterlongo commented 7 years ago

done - commit https://github.com/GATB/short_read_connector/commit/1ad99304fc493f626cbf66a73d2899208511bb82