GEMINI-Medicine / Rgemini

A custom R package that provides a variety of functions to perform data analyses with GEMINI data
https://gemini-medicine.github.io/Rgemini/
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#96 find table names #101

Closed loffleraSMH closed 5 months ago

loffleraSMH commented 6 months ago

Closes #96

I changed a couple of DB queries that previously had hard-coded names for the admdad and lab table. Given that on HPC, those tables are called admdad_subset and lab_subset, respectively, I changed the queries to use the table name returned by find_db_tablename().

I already tested this code on HPC4Health and it now works fine. For the person reviewing: Maybe just briefly review the changed code to make sure rationale/documentation is clear.