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GEMINI-Medicine / Rgemini

A custom R package that provides a variety of functions to perform data analyses with GEMINI data
https://gemini-medicine.github.io/Rgemini/
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Table1 - Show percentage only for suppressed cells #97

Closed shijiaSMH closed 6 months ago

shijiaSMH commented 6 months ago

I have a project which PI think small cells are important to display, as a compromise, we agreed to show percentage. See example below (low risk & intermediate risk).

image

This is a low priority item. We can consider implementation if: a) it's easy to do, b) it's generalize to other projects.

vaakesan-SMH commented 6 months ago

Percentage is equivalent to absolute count in terms of patient risk in the case that we have the overall count, the number of patients is easily backcalculated (i.e I can tell from this table that exactly 1 patient had medication X and is classified as low risk).

For this reason, we also suppress small percentages in our readmission indicator for the MyPractice report (confirmed with Amol and Vlad) in order to prevent this sort of backcalculation.

shijiaSMH commented 6 months ago

Thank you! Then this is not suitable for a feature, closing this issue.