To update at each data release

[jalavery]

Checklist for each data release:

• [ ] Re-run to create df of synapse table IDs, should only require an update to the release_dates tribble to indicate the release date (no longer need to enter manually, but need to review to make sure that automated pull worked as expected)
• [ ] Update pull_data_synapse() tests to include the expected number of rows and columns for the datasets in the release
• [ ] Update each function's documentation to indicate which cohorts are available
• [ ] Add link to analytic data guide in pull_data_synapse()
• [ ] Review create_analytic_cohort() code to make sure variables are applicable and no changes are needed
• [ ] Add link to analytic data guide in README file
• [ ] Re-create drug_regimen_list dataset (after updating synapse_version; don't need to modify the code, just need to re-run the script to create the dataset)

If a new cohort (as opposed to a new release for an existing cohort):

• [ ] Update each function's vignette to indicate which cohorts are available
• [ ] Tests for synapse_data will need to be updated to reflect whether tumor marker or radiation therapy data are curated for the cohort.
• [ ] Add test for drug_regimen_sunburst()

[jalavery]

Dec 2022 update:

• [x] CRC public
• [x] Pancreas 1.1 consortium
• [x] Pancreas 1.2 consortium
• [x] Prostate 1.1 consortium
• [x] Prostate 1.2 consortium
• [x] Bladder 1.1 consortium
• [x] Breast 1.2 consortium

[hfuchs5]

To ask: [ca_radtx_dataset] what is this and should it be uploaded? (in PANC and BLADDER)