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GESIS-Methods-Hub / andrew

Content Aggregation System for tutorials and vignette of reproducible computational methods.
https://gesis-methods-hub.github.io/andrew/
MIT License
2 stars 0 forks source link

Wrong Docker image is being used. #183

Closed rgaiacs closed 11 months ago

rgaiacs commented 11 months ago 
INFO [2023-08-07 13:53:59] andrew/gesis-methods-hub/minimal-example-readme:3fd49dde4fd1bff53471e9c07b0d2086df51e03f already exists. Skipping build.
WARN [2023-08-07 13:53:59] Docker image is NA! Using registry.gitlab.com/quarto-forge/docker/quarto.
INFO [2023-08-07 13:53:59] Location of docker_scripts directory: /home/gitlab-runner/R/library/andrew/docker-scripts
INFO [2023-08-07 13:53:59] Location of pandoc_filters directory: /home/gitlab-runner/R/library/andrew/pandoc-filters
INFO [2023-08-07 13:53:59] Location of output directory: /home/gitlab-runner/builds/objTpwjZ/0/methods-hub/andrew/demo/github.com
INFO [2023-08-07 13:53:59] Location of output directory inside the container: /tmp/andrew
INFO [2023-08-07 13:53:59] Rendering using md2md.sh ...
mkdir: cannot create directory ‘/tmp/andrew/./index’: Permission denied
/tmp/_docker-scripts/md2md.sh: line 17: git: command not found
/tmp/_docker-scripts/md2md.sh: line 19: git: command not found
/tmp/_docker-scripts/md2md.sh: line 24: git: command not found
index.md has a YAML header!
pandoc --output index.md-tmp --shift-heading-level-by 0 --metadata method:true --metadata citation:true --metadata github_https:https://github.com/GESIS-Methods-Hub/complete-example-md --metadata github_user_name:GESIS-Methods-Hub --metadata github_repository_name:complete-example-md --metadata docker_image:registry.gitlab.com/quarto-forge/docker/quarto --metadata git_hash: --metadata git_date: --metadata info_quarto_version:1.4.298 --metadata source_filename:index.md
  to: markdown
  standalone: true
  default-image-extension: png

metadata
  title: Complete Example of Tutorial in Pandoc Markdown
  author:
    - name:
        given: Raniere Gaia
        family: Costa da Silva
      email: Raniere.CostadaSilva@gesis.org
      orcid: 0000-0002-8381-3749
      attributes:
        corresponding: true
      affiliations:
        - name: GESIS Leibniz Institute for the Social Sciences
          department: Computational Social Science
          team: Transparent Social Analytics
          url: '[https://www.gesis.org'](https://www.gesis.org%27/)
    - name:
        given: David
        family: Schoch
      orcid: 0000-0003-2952-4812
      affiliations:
        - name: GESIS Leibniz Institute for the Social Sciences
          department: Computational Social Science
          team: Transparent Social Analytics
          url: '[https://www.gesis.org'](https://www.gesis.org%27/)
  image: img/cover.jpg
  image-alt: Hands typing in a typemachine.
  bibliography:
    - references.bib
  prefer-html: true

File references.bib not found in resource path
INFO [2023-08-07 13:54:07] Rendering complete. Docker returned 1.
INFO [2023-08-07 13:54:07] Rendering using md2qmd.sh ...
mkdir: cannot create directory ‘/tmp/andrew/./index’: Permission denied
cp: cannot create regular file '/tmp/andrew/./index/index.qmd': No such file or directory
INFO [2023-08-07 13:54:07] Rendering complete. Docker returned 1.
INFO [2023-08-07 13:54:07] Rendering using md2ipynb.sh ...
mkdir: cannot create directory ‘/tmp/andrew/./index’: Permission denied
Converted to index.ipynb
cp: cannot create regular file '/tmp/andrew/./index/index.ipynb': No such file or directory
INFO [2023-08-07 13:54:08] Rendering complete. Docker returned 1.
INFO [2023-08-07 13:54:08] Skipping PDF rendering.